Refs - Plant Rhizomes
Plant Rhizomes References  
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The following are the papers referred to at this website. To view the full list from the proposal, see all references

Akamaki, Y. and Ino, Y. (2006) Tubers and rhizome fragments as propagules: competence for vegetative reproduction in Equisetum arvense. J. Plant Res. 119: 677-683

Akashi, R. et al. (1998) High-frequency embryogenesis from cotyledons of bird's-foot trefoil (Lotus corniculatus) and its effective utilization in Agrobacterium tumefaciens-mediated transformation. J. Plant Physiol. 152: 84-91

Andersson, T.N. and Lundegardh, B. (1999) Growth of field horsetail (Equisetum arvense) under low light and low nitrogen conditions. Weed Sci. 47: 41-46

Bahk JD, Lee ES, Kang YM, Choi MS (2004) Cloning and characterization of the tropane alkaloids biosynthesis genes from Scopolia parviflora, a new family of proteins transport into transgenic hairy root lines. Unpublished

Chen Z, Kai G, Liu X, Lin J, Sun X, Tang K (2005) cDNA cloning and characterization of a mannose-binding lectin from Zingiber officinale Roscoe (ginger) rhizomes. J Biosci 30: 213-220

Chen, Z. et al. (2005) cDNA cloning and characterization of a mannose-binding lectin from Zingiber officinale Roscoe (ginger) rhizomes. J Biosci 30: 213-220

Choi KH, Laursen RA (2000) Amino-acid sequence and glycan structures of cysteine proteases with proline specificity from ginger rhizome Zingiber officinale. Eur J Biochem 267: 1516-1526

Choi KH, Laursen RA, Allen KN (1999) The 2.1 A structure of a cysteine protease with proline specificity from ginger rhizome, Zingiber officinale. Biochemistry 38: 11624-11633

Crowley, P.H., Stieha, C.R., & McLetchie, D.N. (2005) Overgrowth competition, fragmentation and sex-ratio dynamics: a spatially explicit, sub-individual-based model. Journal of Theoretical Biology 233: 25-42

Day G-j, Chen Z-Y, Chow T-Y (1992) Nelumbo nucifera mature rhizome tuber cDNA to mRNA. Unpublished

Eggers, T. and Zwerger, P. (2002) Long-term development of selected weed species on railway tracks. J. Plant Dis. Protect.

Fernandez, O.N. (2003) Establishment of Cynodon dactylon from stolon and rhizome fragments. Weed Res. 43: 130-138

Fischer, S., Berti, M., Wilckens, R., & Del Pozo, A. (2006) Development of vegetative propagation for Actaea racemosa Nutt. Indust. Crops Products 24: 244-252

Fushimi H, Komatsu K, Isobe M, Namba T (1997) Application of PCR-RFLP and MASA analyses on 18S ribosomal RNA gene sequence for the identification of three Ginseng drugs. Biol Pharm Bull 20: 765-769

Houghton, P.J., Mukherjee, P.K., Kumar, V., & Mal, M. (2006) Acetylcholinesterase inhibition of oil from Acorus calamus rhizome. Planta Med. 72: 996-996

Hu, F.R. et al. (2005) Agrobacterium-mediated transformed transgenic triploid bermudagrass (Cynodon dactylon x C. transvaalensis) plants are highly resistant to the glufosinate herbicide Liberty. Plant Cell Tissue Organ Cult. 83: 13-19

Imaizumi, R. et al. (2005) Activation tagging approach in a model legume, Lotus japonicus. J. Plant Res. 118: 391-399

Jang, C.S. et al. (2006) Functional classification, genomic organization, putatively cis-acting regulatory elements, and relationship to quantitative trait loci, of sorghum genes with rhizome-enriched expression. Plant Physiol. 142: 1148-1159

Jiang, H. et al. (2005) Metabolic profiling, phylogenetic analysis and anti-inflammatory investigation of Zingiber species: tools for authentication of ginger (Zingiber officinale Rosc.). Phytochemistry 67: doi:210.1016/j.phytochem.2005.1008.1001

Jiang, H. (2005) PhD Dissertation, The University of Arizona

Joseph A, Thayumanavan B, Manickam A, Panicker PR (2006) Direct Submission. P85026. In UniProtKB

Kim M, Ebert PR, Hamilton SE (2004) Differential expression of cysteine protease genes during development of the ginger rhizome (Zingiber officinale). Unpublished

Larson SR, Hu Z (2002) Molecular genetic linkage maps for Leymus wildryes. Unpublished

Lerner DR, Raikhel NV (1992) The gene for stinging nettle lectin (Urtica dioica agglutinin) encodes both a lectin and a chitinase. J Biol Chem 267: 11085-11091

Li, B. & Beuselinck, P.R. (1996) Rhizomatous Lotus corniculatus L .2. Morphology and anatomy of rhizomes. Crop Sci. 36: 407-411

Li, L., Li, R., Fei, S., & Qu, R. (2005) Agrobacterium-Mediated transformation of common bermudagrass (Cynodon dactylon). Plant Cell Tissue Organ Cult. 83: 223-229

Ma, X.-Q. & Gang, D.R. (2006) Metabolic profiling of turmeric (Curcuma longa L.) plants derived from in vitro micropropagation and conventional greenhouse cultivation J. Agric. Food. Chem.

Ma, X.-Q. et al. (2008) Ginger and turmeric expressed sequence tags identify signature genes for rhizome identity and development and the biosynthesis of curcuminoids and gingerols. Plant Physiol. Submitted

Ma, X.-Q. and Gang, D.R. (2005) Metabolic profiling of in vitro micropropagated and conventionally greenhouse grown ginger (Zingiber officinale). Phytochemistry 67: 2239-2255

Maeda, D. et al. (2006) Knockdown of an arbuscular mycorrhiza-inducible phosphate transporter gene of Lotus japonicus suppresses mutualistic symbiosis. Plant Cell Physiol. 47: 807-817

Masuda, J., Urakawa, T., Ozaki, Y., & Okubo, H. (2006) Short photoperiod induces dormancy in lotus (Nelumbo nucifera). Ann. Bot. 97: 39-45

Masuda, J., Ozaki, Y., & Okubo, H. (2007) Rhizome transition to storage organ is under phytochrome control in lotus (Nelumbo nucifera). Planta 226: 909-915

McCoy, J.A. et al. (2007) Influence of rhizome propagule size on yields and triterpene glycoside concentrations of black cohosh [Actaea racemosa L. syn Cimicifuga racemosa (L.) Nuttal]. Hortscience 42: 61-64

Mehrotra, S. et al. (2003) Anticellular and immunosuppressive properties of ethanolic extract of Acorus calamus rhizome. Internat. Immunopharmacol. 3: 53-61

Mercier, F. and Balansard, J. (1935) The constituents of rhizome of Cimicifuga racemosa. Comptes Rendus Des Seances De La Societe De Biologie Et De Ses Filiales 118: 166-168

Mukherjee, P.K., Kumar, V., Mal, M., & Houghton, P.J. (2007) Acorus calamus: Scientific validation of ayurvedic tradition from natural resources. Pharmaceutical Biology 45: 651-666

Nakatsukasa-Akune, M. et al. (2005) Suppression of root nodule formation by artificial expression of the TrEnodDR1 (coat protein of white clover cryptic virus 1) gene in Lotus japonicus. Molec. Plant-Microbe Interact. 18: 1069-1080

Nualsri, C. & Beuselinck, P.R. (1998) Rhizomatous Lotus corniculatus: IV. Inheritance of rhizomes. Crop Sci. 38: 1175-1179

Nualsri, C., Beuselinck, P.R., & Steiner, J.J. (1998) Rhizomatous Lotus corniculatus L.: III. Introgression of rhizomes into autogamous germplasm. Crop Sci. 38: 503-509

Oremykin, V.V., Holland, B., Hirsch-Ernst, K.I., & Hellwig, F.H. (2005) Analysis of Acorus calamus chloroplast genome and its phylogenetic implications. Molec. Biol. Evol. 22: 1813-1822

Pai, A. and McCarthy, B.C. (2005) Variation in shoot density and rhizome biomass of Acorus calamus L. with respect to environment. Castanea 70: 263-275

Paterson, A.H. et al. (1995) The weediness of wild plants - molecular analysis of genes influencing dispersal and persistence of johnsongrass, Sorghum halepense (L) Pers. Proc. Natl. Acad. Sci. USA 92: 6127-6131

Peng H, Jin Q, Lin E, Zhu M (2005) Cloning and functional analysis of genes related to meristem development in bamboo. Unpublished

Picaud S, Olsson ME, Brodelius M, Brodelius PE (2006) Cloning, expression, purification and characterization of recombinant (+)-germacrene D synthase from Zingiber officinale. Arch Biochem Biophys 452: 17-28

Robbins, M.P., Bavage, A.D., Strudwicke, C., & Morris, P. (1998) Genetic manipulation of condensed tannins in higher plants II. Analysis of birdsfoot trefoil plants harboring antisense dihydroflavonol reductase constructs. Plant Physiol. 116: 1133-1144

Room, P.M. (1983) Falling apart as a lifestyle - the rhizome architecture and population-growth of Salvinia molesta. J. Ecol. 71: 349-365

Shen-Miller, J. (2002) Sacred lotus, the long-living fruits of China Antique. Seed Sci. Res. 12: 131-143

Skipper M (2002) Genes from the APETALA3 and PISTILLATA lineages are expressed in developing vascular bundles of the tuberous rhizome, flowering stem and flower Primordia of Eranthis hyemalis. Ann Bot 89: 83-88

Soster, M.T.B., Scheffer-Basso, S.M., & Dall'Agnol, M. (2004) Morphophysiological characterization on the birdsfoot trefoil genotypes (Lotus corniculatus L.). Brazil. J. Animal Sci. 33: 1654-1661

Srinivas L, Chethankumar M, Sampathkumar S (2007) Direct Submission. In UniProtKB

Steiner, J.J. & de los Santos, G.G. (2001) Adaptive ecology of Lotus corniculatus L. genotypes: I. Plant morphology and RAPD maker characterizations. Crop Sci. 41: 552-563

Sun, Y.X. et al. (2006) Studies on the overexpression of the soybean GmNHX1 in Lotus corniculatus: The reduced Na+ level is the basis of the increased salt tolerance. Chin. Sci. Bull. 51: 1306-1315

Tateno H, Winter HC, Petryniak J, Goldstein IJ (2003) Purification, characterization, molecular cloning, and expression of novel members of jacalin-related lectins from rhizomes of the true fern Phlebodium aureum (L) J. Smith (Polypodiaceae). J Biol Chem 278: 10891-10899

Techaprasan J, Ngamriabsakul C, Klinbunga S, Chusacultanachai S, Jenjittikul T (2006) Genetic variation and species identification of Thai Boesenbergia (Zingiberaceae) analyzed by chloroplast DNA polymorphism. J Biochem Mol Biol 39: 361-370

Van Damme EJ, Barre A, Verhaert P, Rouge P, Peumans WJ (1996) Molecular cloning of the mitogenic mannose/maltose-specific rhizome lectin from Calystegia sepium. FEBS Lett 397: 352-356

Wu X, Larson SR, Hu Z, Palazzo AJ, Jones TA, Wang RR, Jensen KB, Chatterton NJ (2003) Molecular genetic linkage maps for allotetraploid Leymus wildryes (Gramineae: Triticeae). Genome 46: 627-646

Xia ZQ, Costa MA, Proctor J, Davin LB, Lewis NG (2000) Dirigent-mediated podophyllotoxin biosynthesis in Linum flavum and Podophyllum peltatum. Phytochemistry 55: 537-549

Xia ZQ, Costa MA, Pelissier HC, Davin LB, Lewis NG (2001) Secoisolariciresinol dehydrogenase purification, cloning, and functional expression. Implications for human health protection. J Biol Chem 276: 12614-12623

Yazaki K, Shitan N, Takamatsu H, Ueda K, Sato F (2001) A novel Coptis japonica multidrug-resistant protein preferentially expressed in the alkaloid-accumulating rhizome. J Exp Bot 52: 877-879

Youn B, Moinuddin SG, Davin LB, Lewis NG, Kang C (2005) Crystal structures of apo-form and binary/ternary complexes of Podophyllum secoisolariciresinol dehydrogenase, an enzyme involved in formation of health-protecting and plant defense lignans. J Biol Chem 280: 12917-12926

Zhang, G. et al. (2003) Transformation of triploid bermudagrass (Cynodon dactylon x C. transvaalensis cv. TifEagle) by means of biolistic bombardment. Plant Cell Rep. 21: 860-864

Zierau, O. et al. (2002) Antiestrogenic activities of Cimicifuga racemosa extracts. J. Steroid Biochem. Molec. Biol. 80: 125-130

van Kleunen, M. (2007) Adaptive genetic differentiation in life-history traits between populations of Mimulus guttatus with annual and perennial life-cycles. Evol. Ecol. 21: 185-199



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Last updated: 13 May 2009